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Bc. Branislav Brozmann

Bachelor's thesis

Standardisation of Biochemical Space Language

Standardisation of Biochemical Space Language
Abstract:
Cieľom tejto práce bolo nájsť vzťah medzi SBML-multi a Biochemical Space Language (BCSL) a taktiež implementovať export BCSL modelov do SBML-multi formátu. BCSL je rule-based jazyk ktorý vznikol v System Biology Laboratory, na Fakulte Informatiky Masarykovej Univerzity, slúžiaci na reprezentáciu biologických procesov. SBML-multi je štandard, ktorý je navrhnutý tak aby umožnil prenositeľnosť biologických …more
Abstract:
Aim of this thesis was to find a relation between SBML-multi and BioChemical Space Language (BCSL) and to implement the export of BCSL models to SBML-multi format. BCSL is a rule-based language developed at Systems Biology Laboratory, Faculty of Informatics, Masaryk University, used to represent biological processes. SBML-multi is a standard which is designed to enable the transferability of biological …more
 

Keywords

systems biology standardisation rule-based modelling SBML BCSL
 
Language used: English
Date on which the thesis was submitted / produced: 18. 5. 2023
Identifier: https://is.muni.cz/th/w9kcd/

Thesis defence

  • Date of defence: 30. 6. 2023
  • Supervisor: RNDr. Matej Troják, Ph.D.
  • Reader: doc. RNDr. David Šafránek, Ph.D.

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Masaryk University

Faculty of Informatics

Bachelor programme / field:
Applied Informatics / Bioinformatics

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