Chromatin Visualization in Jupyter Notebook and VR – Bc. Martin Beľa
Bc. Martin Beľa
Master's thesis
Chromatin Visualization in Jupyter Notebook and VR
Chromatin Visualization in Jupyter Notebook and VR
Abstract:
Cieľom mojej práce je vizualizácia chromatínu, ktorá zobrazuje polohy segmentov chromatínu predpovedaných zo vzdialeností medzi segmentmi generovanými metódou Hi-C. Táto vizualizácia je integrovaná do notebooku Jupyter, čo umožňuje súčasnú vizualizáciu, predspracovanie údajov a analýzu v rámci jednej platformy. Okrem toho bolo vytvorené VR zobrazenie, ktoré je plynule spojené s vizualizáciou v Jupyter …moreAbstract:
The aim of my thesis was to develop a chromatin visualization that displays the positions of chromatin segments predicted from distances between segments generated by the Hi-C method. The visualization is integrated into Jupyter Notebook, which allows for simultaneous visualization, data preprocessing, and analysis within the same platform. Additionally, a VR view was developed. It is seamlessly connected …more
Language used: English
Date on which the thesis was submitted / produced: 21. 5. 2024
Identifier:
https://is.muni.cz/th/xktg1/
Thesis defence
- Date of defence: 17. 6. 2024
- Supervisor: RNDr. Jan Byška, Ph.D.
- Reader: RNDr. Filip Opálený
Citation record
Full text of thesis
Contents of on-line thesis archive
Published in Theses:- světu
Other ways of accessing the text
Institution archiving the thesis and making it accessible: Masarykova univerzita, Fakulta informatikyMasaryk University
Faculty of InformaticsMaster programme / field:
Visual informatics / Computer graphics and visualisation
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