\kur{De novo} sekvenování genomu \kur{Crenicichla semifasciata} technologií Oxford Nanopore – Adela MIKEŠOVÁ
Adela MIKEŠOVÁ
Bachelor's thesis
\kur{De novo} sekvenování genomu \kur{Crenicichla semifasciata} technologií Oxford Nanopore
Abstract:
The submitted bachelor thesis deals with de novo sequencing of genome of the cichlid species Crenicichla semifasciata on the Oxford Nanopore platform and its assembly with the Flye algorithm. The study further investigates the influence of sequencing depth on the BUSCO completeness assessment and N50 metrics of the obtained assembly.Abstract:
The submitted bachelor thesis deals with de novo sequencing of genome of the cichlid species Crenicichla semifasciata on the Oxford Nanopore platform and its assembly with the Flye algorithm. The study further investigates the influence of sequencing depth on the BUSCO completeness assessment and N50 metrics of the obtained assembly.
Language used: Czech
Date on which the thesis was submitted / produced: 13. 4. 2022
Thesis defence
- Supervisor: RNDr. Ing. Lubomír Piálek, Ph.D.
Citation record
ISO 690-compliant citation record:
MIKEŠOVÁ, Adela. \textit{$\backslash$kur$\{$De novo$\}$ sekvenování genomu $\backslash$kur$\{$Crenicichla semifasciata$\}$ technologií Oxford Nanopore}. Online. Bachelor's thesis. České Budějovice: University of South Bohemia in České Budějovice, Faculty of Science. 2022. Available from: https://theses.cz/id/7oztg8/.
The right form of listing the thesis as a source quoted
MIKEŠOVÁ, Adela. \kur{De novo} sekvenování genomu \kur{Crenicichla semifasciata} technologií Oxford Nanopore. České Budějovice, 2022. bakalářská práce (Bc.). JIHOČESKÁ UNIVERZITA V ČESKÝCH BUDĚJOVICÍCH. Přírodovědecká fakulta
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Institution archiving the thesis and making it accessible: JIHOČESKÁ UNIVERZITA V ČESKÝCH BUDĚJOVICÍCH, Přírodovědecká fakultaUNIVERSITY OF SOUTH BOHEMIA IN ČESKÉ BUDĚJOVICE
Faculty of ScienceBachelor programme / field:
Biology / Biomedical Laboratory Techniques
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Bulánová, L.
14/4/2022