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Bc. Šimon Varga

Bachelor's thesis

Computing isomorphic condensations in state-graphs of parametrised Boolean networks

Computing isomorphic condensations in state-graphs of parametrised Boolean networks
Abstract:
Booleovské siete sú užitočným nástrojom pri modelovaní biologických procesov. Pridaním parametrov do tohto modelu sa umožní analýza viacerých prípustných podôb správania sa systému. Táto práca má za cieľ rozklad priestoru validných parametrizácií v závislosti na zvolenej relácie ekvivalencie zachycujúcej podobnosti medzi parametrizáciami. Tu použitá ekvivalencia je izomorfizmus medzi stavovo-prechodnými …more
Abstract:
Boolean networks provide a valuable framework for modeling biological processes. By introducing parameters into the model, various possible behaviors can be considered and analyzed. This work aims to partition the space of valid parametrizations depending on a chosen equivalence relation capturing similarities among parametrizations. The used equivalence is an isomorphism between state-transition graphs …more
 

Keywords

boolean network parametrized boolean network state-transition graph colored graph graph condensation graph isomorphism
 
Language used: English
Date on which the thesis was submitted / produced: 25. 5. 2021
Identifier: https://is.muni.cz/th/leqr7/

Thesis defence

  • Date of defence: 1. 7. 2021
  • Supervisor: prof. RNDr. Luboš Brim, CSc.
  • Reader: Mgr. Samuel Pastva

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Institution archiving the thesis and making it accessible: Masarykova univerzita, Fakulta informatiky
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Masaryk University

Faculty of Informatics

Bachelor programme / field:
Applied Informatics / Bioinformatics

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