Mgr. Jaromír Svoboda

Bachelor's thesis

Identification of Chemical Bonds in Proteins

Identification of Chemical Bonds in Proteins
Abstract:
Struktura proteinů (a jiných biochemických sloučenin) je často reprezentována prostřednictvím Protein Data Bank (PDB) formátu. Nedostatkem tohoto formátu je, že neobsahuje informace o vazbách mezi atomy. Tyto informace jsou nicméně důležité z hlediska další analýzy proteinů. Cílem této práce je navrhnout, implementovat a otestovat algoritmus, který je schopen na základě informací obsažených v PDB formátu …more
Abstract:
The structure of proteins (and other biochemical compounds) is often described using Protein Data Bank file format. The major drawback of the format is the lack of bond information as such information is frequently used in various protein analysis algorithms. This thesis is focused on developing an algorithm to determine the bonding information (i.e. which atoms form a bond and what kind of bond it …more
 
 
Language used: English
Date on which the thesis was submitted / produced: 21. 5. 2012

Thesis defence

  • Date of defence: 20. 6. 2012
  • Supervisor: RNDr. David Sehnal, Ph.D.
  • Reader: Mgr. Ing. Crina-Maria Ionescu, Ph.D.

Citation record

Full text of thesis

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Institution archiving the thesis and making it accessible: Masarykova univerzita, Fakulta informatiky

Masaryk University

Faculty of Informatics

Bachelor programme / field:
Applied Informatics / Applied Informatics

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