Bc. Jana Navrkalová

Bachelor's thesis

Semi-automatic segmentation of microscopy images

Semi-automatic segmentation of microscopy images
Abstract:
Tato práce se zabývá segmentací obrazu. Hlavním cílem této práce bylo prozkoumat semi-automatické nástroje pro segmentaci obrazů buněk se složitým tvarem, porovnat nástroje s manuálními a doporučit vhodný semi-automatický nástroj pro účely Cell Tracking Challenge (CTC). Segmentovali jsme dvou dimenzionální mikroskopické obrazy buněk se složitým tvarem z CTC datasetů ve vybraných aplikacích a nástrojích …more
Abstract:
This work deals with image segmentation. The main goal of this thesis was to investigate semi-automatic tools for segmentation images of cells with complex shapes, compare them with manual tools, and recommend suitable tools for the purpose of the Cell Tracking Challenge (CTC). We segmented two-dimensional microscopy images with complex shapes from the CTC datasets in selected applications and tools …more
 
 
Language used: English
Date on which the thesis was submitted / produced: 16. 12. 2021

Thesis defence

  • Date of defence: 8. 2. 2022
  • Supervisor: doc. RNDr. Petr Matula, Ph.D.
  • Reader: doc. RNDr. Martin Maška, Ph.D.

Citation record

Full text of thesis

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Institution archiving the thesis and making it accessible: Masarykova univerzita, Fakulta informatiky

Masaryk University

Faculty of Informatics

Bachelor programme / field:
Informatics / Informatics